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Intron Name: Anas_platyrhynchos_platyrhynchos_11_3940699_3941656_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3940699 - 3941656

Intron Length:

958

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGCATT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTAATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAC

U12 Branch Point Sequence:

TTTTTTTTAATA

Flanking Amino Acid:

IQIQQKEAYEEMQAKLAAQK

Intron Amino Acid Position:

620

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.2

1.02

0.8

90.9

28.7

Major BPS

84.6

0.86

0.8

83.9

22.3

Major PPT

86.6

0.82

0.7

85.3

27.9

Minor 5ss

45.3

-0.5

2.9

45.2

Minor BPS

82.2

1.01

0.9

86.33

25.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008051

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028111

3938925 - 3941794

2870

ENSAPLT00000020116

3938925 - 3941794

2870

ENSAPLT00000008386

3907333 - 3941794

34462