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Intron Name: Anas_platyrhynchos_platyrhynchos_11_4031656_4032441_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4031656 - 4032441

Intron Length:

786

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGGCAG

5'SS Class:

major

3'SS Sequence:

TTTCCTGTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTAAT

U12 Branch Point Sequence:

TTGGACTTAATG

Flanking Amino Acid:

VSSAMQAGTVWINCYNALNA

Intron Amino Acid Position:

453

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.5

0.7

62.2

43.7

Major BPS

78.2

0.7

77.9

32.1

Major PPT

85.2

0.79

0.8

79.7

32.4

Minor 5ss

30.2

-2.3

3.2

35.3

42.3

Minor BPS

59.8

0.17

1.7

63.96

44.3

Associated Gene:

Gene:

ALDH1A2

Ensembl Gene ID:

ENSAPLG00000008541

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022775

4026795 - 4058063

31269

ENSAPLT00000008981

4031460 - 4058063

26604