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Intron Name: Anas_platyrhynchos_platyrhynchos_11_4033182_4033854_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4033182 - 4033854

Intron Length:

673

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATGAA

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAGTCAA

U12 Branch Point Sequence:

TGGCCTGCAAGT

Flanking Amino Acid:

FDPTTEQGPQIDKKQYNKIL

Intron Amino Acid Position:

346

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

27.6

Major BPS

0.23

1.1

61.4

36.2

Major PPT

0.9

0.6

88.4

21.2

Minor 5ss

31.4

-2.1

3.2

39.9

46.1

Minor BPS

40.8

-0.6

2.3

Associated Gene:

Gene:

ALDH1A2

Ensembl Gene ID:

ENSAPLG00000008541

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022775

4026795 - 4058063

31269

ENSAPLT00000008981

4031460 - 4058063

26604