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Intron Name: Anas_platyrhynchos_platyrhynchos_11_4037073_4046269_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4037073 - 4046269

Intron Length:

9197

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

CATTTCCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTACAT

U12 Branch Point Sequence:

TTGCCTGTAAAA

Flanking Amino Acid:

DKIAFTGSTEVGKLIQEAAG

Intron Amino Acid Position:

250

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.4

1.14

0.6

94.3

17.7

Major BPS

61.4

0.28

1.1

36.5

Major PPT

84.5

0.78

0.8

81.4

30.2

Minor 5ss

38.6

-1.3

3.4

57.8

46.8

Minor BPS

49.4

-0

2.1

65.77

40.7

Associated Gene:

Gene:

ALDH1A2

Ensembl Gene ID:

ENSAPLG00000008541

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022775

4026795 - 4058063

31269

ENSAPLT00000008981

4031460 - 4058063

26604