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Intron Name: Anas_platyrhynchos_platyrhynchos_11_4046384_4046513_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4046384 - 4046513

Intron Length:

130

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGAATA

5'SS Class:

strong_major

3'SS Sequence:

CCTATTTTGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

CCTATTTTGACA

Flanking Amino Acid:

ALYMGALIKEAGFPPGVVNI

Intron Amino Acid Position:

212

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.1

1.04

0.7

89.9

22.1

Major BPS

100

1.24

0.5

100

Major PPT

0.56

71.3

38.3

Minor 5ss

37.1

-1.5

48.8

46.9

Minor BPS

57.2

0.22

1.3

61.67

39.1

Associated Gene:

Gene:

ALDH1A2

Ensembl Gene ID:

ENSAPLG00000008541

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008981

4031460 - 4058063

26604

ENSAPLT00000022775

4026795 - 4058063

31269