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Intron Name: Anas_platyrhynchos_platyrhynchos_11_4046643_4049281_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4046643 - 4049281

Intron Length:

2639

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTGAGTATC

5'SS Class:

major

3'SS Sequence:

TTTTTTCCTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

CATCTATCAACT

Flanking Amino Acid:

PIGVCGQIIPWNFPLLMFAW

Intron Amino Acid Position:

169

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.54

1.1

74.7

35.4

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

93.2

0.97

0.6

88.6

21.1

Minor 5ss

37.8

-1.4

55.7

41.6

Minor BPS

49.1

0.01

1.8

68.09

42.2

Associated Gene:

Gene:

ALDH1A2

Ensembl Gene ID:

ENSAPLG00000008541

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008981

4031460 - 4058063

26604

ENSAPLT00000022775

4026795 - 4058063

31269