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Intron Name: Anas_platyrhynchos_platyrhynchos_11_4204235_4205790_F

Intron Information:

Intron Rank:

Intron Class:

major_hybrid

Intron Phase:

Intron Coordinates:

4204235 - 4205790

Intron Length:

1556

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTATGAACT

5'SS Class:

major

3'SS Sequence:

AAAACAAAAACAG|G

3'SS Class:

major_hybrid

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTTTTTTTAAAC

Flanking Amino Acid:

PLVMIVHGWSVDGILEDWIW

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.8

0.61

71.2

38.6

Major BPS

90.4

0.7

90.2

19.3

Major PPT

47.4

-0.1

1.1

34.9

38.1

Minor 5ss

42.7

-0.8

2.9

44.1

Minor BPS

76.4

0.81

1.2

82.98

29.8

Associated Gene:

Gene:

LIPC

Ensembl Gene ID:

ENSAPLG00000014018

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018902

4204031 - 4218061

14031

ENSAPLT00000014624

4204031 - 4219458

15428