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Intron Name: Anas_platyrhynchos_platyrhynchos_11_4210844_4212306_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4210844 - 4212306

Intron Length:

1463

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGAACC

5'SS Class:

strong_major

3'SS Sequence:

ATGTTTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTAAA

U12 Branch Point Sequence:

GCATGCAAAATT

Flanking Amino Acid:

YNHIAQYGITGITQTVKCAH

Intron Amino Acid Position:

246

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

0.9

74.3

34.1

Major BPS

70.1

0.5

1.1

69.9

35.3

Major PPT

86.9

0.83

0.8

85.1

34.9

Minor 5ss

34.9

-1.7

2.9

42.4

38.2

Minor BPS

42.6

-0.4

2.2

58.09

Associated Gene:

Gene:

LIPC

Ensembl Gene ID:

ENSAPLG00000014018

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042805

4204031 - 4219458

15428

ENSAPLT00000018902

4204031 - 4218061

14031

ENSAPLT00000014624

4204031 - 4219458

15428