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Intron Name: Anas_platyrhynchos_platyrhynchos_11_4225606_4226057_R


Intron Information:

Intron Rank:
14

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
4225606 - 4226057

Intron Length:
452

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAAGCAGA

5'SS Class:
strong_major

3'SS Sequence:
TTCTTTGAAACAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTAAT

U12 Branch Point Sequence:
TTTGTTTTAATA

Flanking Amino Acid:
PKLPPHKPLPGTLKRRRPPQ

Intron Amino Acid Position:
681

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
89.5
0.93
0.9
78
38.6

Major BPS
99.5
1.23
0.5
98.2
4.2

Major PPT
72.6
0.51
1
69.7
39.6

Minor 5ss
38.7
-1.3
2.8
49.1
46.7

Minor BPS
71.7
0.68
1.3
78
33.3

Associated Gene:

Gene:
ADAM10

Ensembl Gene ID:

Chromosome:
11

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

4225511 - 4261374
35864