Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_11_4238390_4239782_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4238390 - 4239782

Intron Length:

1393

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATAAAAC

5'SS Class:

major

3'SS Sequence:

TGTGTATATACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTAAT

U12 Branch Point Sequence:

ACATGTAAAACT

Flanking Amino Acid:

MTGIEEPTTEKPFEEPNSNG

Intron Amino Acid Position:

159

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

70.1

33.8

Major BPS

77.9

0.69

0.8

75.9

Major PPT

72.9

0.52

66.1

43.6

Minor 5ss

39.2

-1.2

2.9

51.4

45.5

Minor BPS

42.6

-0.4

2.2

59.51

Associated Gene:

Gene:

ADAM10

Ensembl Gene ID:

ENSAPLG00000013495

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014170

4225511 - 4261374

35864