Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_11_4239887_4246787_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4239887 - 4246787

Intron Length:

6901

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTGAGTATT

5'SS Class:

major

3'SS Sequence:

TTCCTCTTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTGAA

U12 Branch Point Sequence:

TGAATTTGAAAC

Flanking Amino Acid:

HSVIYHEDDIKYPHKYGPQG

Intron Amino Acid Position:

124

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.2

0.62

32.8

Major BPS

78.4

0.71

0.9

69.4

37.7

Major PPT

85.4

0.8

0.6

84.6

23.2

Minor 5ss

38.4

-1.3

41.2

Minor BPS

47.6

-0.2

1.5

54.87

36.3

Associated Gene:

Gene:

ADAM10

Ensembl Gene ID:

ENSAPLG00000013495

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014170

4225511 - 4261374

35864