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Intron Name: Anas_platyrhynchos_platyrhynchos_11_4274264_4275939_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

4274264 - 4275939

Intron Length:

1676

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGCGGGG

5'SS Class:

major

3'SS Sequence:

TTCTTTTCCCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTAAT

U12 Branch Point Sequence:

CCTCTCCAAATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.5

0.32

1.3

43.3

Major BPS

81.9

0.79

0.9

80.1

Major PPT

86.6

0.82

0.7

80.5

31.5

Minor 5ss

32.8

-2

3.8

46.4

Minor BPS

45.2

-0.2

1.9

60.92

43.5

Associated Gene:

Gene:

MINDY2

Ensembl Gene ID:

ENSAPLG00000013166

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038263

4274032 - 4297334

23303