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Intron Name: Anas_platyrhynchos_platyrhynchos_11_4308481_4308814_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4308481 - 4308814

Intron Length:

334

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACAGAAA

5'SS Class:

major

3'SS Sequence:

CTTTTGTTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTTTTTTTAAAA

Flanking Amino Acid:

GGGGMMSPHTSNSSPINRVV

Intron Amino Acid Position:

1009

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.4

0.53

1.1

68.4

38.1

Major BPS

90.4

0.7

90.2

19.3

Major PPT

88.1

0.86

0.8

80.3

37.3

Minor 5ss

29.9

-2.3

3.3

39.1

46.3

Minor BPS

76.9

0.84

1.2

83.98

29.3

Associated Gene:

Gene:

SLTM

Ensembl Gene ID:

ENSAPLG00000013025

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013588

4308292 - 4333403

25112

ENSAPLT00000046857

4308292 - 4333403

25112