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Intron Name: Anas_platyrhynchos_platyrhynchos_11_4320726_4322083_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4320726 - 4322083

Intron Length:

1358

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTTTG

5'SS Class:

strong_major

3'SS Sequence:

TAAATCCTCTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

TTCCTGTTAAAT

Flanking Amino Acid:

HDGEDEENEKDKAGSGDGTQ

Intron Amino Acid Position:

209

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.6

0.91

0.8

80.5

Major BPS

88.7

0.96

0.8

36.5

Major PPT

66.2

0.37

0.9

63.1

38.8

Minor 5ss

49.9

-0

2.4

66.4

45.1

Minor BPS

51.2

0.12

2.1

74.05

42.7

Associated Gene:

Gene:

SLTM

Ensembl Gene ID:

ENSAPLG00000013025

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046857

4308292 - 4333403

25112

ENSAPLT00000013588

4308292 - 4333403

25112