Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_11_4323079_4323503_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4323079 - 4323503

Intron Length:

425

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTCTTG

5'SS Class:

major

3'SS Sequence:

TATGTCTTCATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TATGTCTTCATA

Flanking Amino Acid:

EDVEKDSESQENEGQDIEDY

Intron Amino Acid Position:

184

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.47

1.1

62.7

44.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

74.5

0.55

0.9

69.2

36.7

Minor 5ss

46.5

-0.4

3.1

64.7

46.6

Minor BPS

54.4

0.13

1.8

67.46

39.7

Associated Gene:

Gene:

SLTM

Ensembl Gene ID:

ENSAPLG00000013025

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013588

4308292 - 4333403

25112