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Intron Name: Anas_platyrhynchos_platyrhynchos_11_4333555_4350234_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4333555 - 4350234

Intron Length:

16680

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGGCGGC

5'SS Class:

major

3'SS Sequence:

TTTTTATTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTCTAATG

Flanking Amino Acid:

AHLAPGPPRQRPFLKLSMSK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.3

0.55

1.1

58.1

Major BPS

96.5

1.15

0.6

34.2

Major PPT

88.4

0.86

0.7

82.1

34.6

Minor 5ss

29.8

-2.3

3.5

40.6

Minor BPS

62.3

0.25

1.7

71.16

36.4

Associated Gene:

Gene:

RNF111

Ensembl Gene ID:

ENSAPLG00000012549

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013094

4333478 - 4383556

50079

ENSAPLT00000024055

4333478 - 4383556

50079