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Intron Name: Anas_platyrhynchos_platyrhynchos_11_4351131_4360499_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4351131 - 4360499

Intron Length:

9369

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAACTG

5'SS Class:

strong_major

3'SS Sequence:

CTTTCCTCATTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATTAA

U12 Branch Point Sequence:

CTTTCCTCATTA

Flanking Amino Acid:

NHQNNTAVPSGSIDEDVVVI

Intron Amino Acid Position:

325

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

68.8

42.1

Major BPS

58.9

0.22

50.1

34.6

Major PPT

0.56

0.8

75.1

28.6

Minor 5ss

34.9

-1.7

3.3

47.4

Minor BPS

58.5

0.26

1.8

71.35

41.4

Associated Gene:

Gene:

RNF111

Ensembl Gene ID:

ENSAPLG00000012549

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022205

4350235 - 4383556

33322

ENSAPLT00000013094

4333478 - 4383556

50079

ENSAPLT00000024055

4333478 - 4383556

50079