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Intron Name: Anas_platyrhynchos_platyrhynchos_11_4367212_4368059_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4367212 - 4368059

Intron Length:

848

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCACGTTTA

5'SS Class:

strong_major

3'SS Sequence:

TTTGTTTATGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

ATTGCTTGAAAA

Flanking Amino Acid:

SSSGTSYHEQQALPVDLSSN

Intron Amino Acid Position:

595

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.1

0.95

0.9

75.9

39.6

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

85.3

0.79

0.9

81.4

35.3

Minor 5ss

32.4

-2

4.1

49.1

47.1

Minor BPS

55.8

0.18

1.6

67.92

38.2

Associated Gene:

Gene:

RNF111

Ensembl Gene ID:

ENSAPLG00000012549

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013094

4333478 - 4383556

50079

ENSAPLT00000024055

4333478 - 4383556

50079

ENSAPLT00000022205

4350235 - 4383556

33322