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Intron Name: Anas_platyrhynchos_platyrhynchos_11_4372905_4378822_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4372905 - 4378822

Intron Length:

5918

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGGAGA

5'SS Class:

strong_major

3'SS Sequence:

GCTGTTTGAATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAA

U12 Branch Point Sequence:

TTTAACTTAACA

Flanking Amino Acid:

HLQIGALPLMVPDMAGYPHI

Intron Amino Acid Position:

882

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

71.4

40.1

Major BPS

82.1

0.8

71.6

36.4

Major PPT

61.6

0.26

1.1

57.9

42.1

Minor 5ss

31.8

-2.1

3.1

36.7

42.5

Minor BPS

76.7

0.84

1.5

85.69

32.8

Associated Gene:

Gene:

RNF111

Ensembl Gene ID:

ENSAPLG00000012549

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022205

4350235 - 4383556

33322

ENSAPLT00000013094

4333478 - 4383556

50079