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Intron Name: Anas_platyrhynchos_platyrhynchos_11_4381667_4382309_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4381667 - 4382309

Intron Length:

643

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATAGT

5'SS Class:

strong_major

3'SS Sequence:

GTTTTGATGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TCTGTTTTGATG

Flanking Amino Acid:

LSILEEGEDVRRLPCMHLFH

Intron Amino Acid Position:

979

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.8

0.89

0.9

84.2

33.9

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

70.5

0.46

1.1

65.6

44.4

Minor 5ss

36.8

-1.5

2.9

51.6

44.9

Minor BPS

-0

1.4

56.5

40.4

Associated Gene:

Gene:

RNF111

Ensembl Gene ID:

ENSAPLG00000012549

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024055

4333478 - 4383556

50079

ENSAPLT00000022205

4350235 - 4383556

33322

ENSAPLT00000013094

4333478 - 4383556

50079