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Intron Name: Anas_platyrhynchos_platyrhynchos_11_4399909_4401600_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4399909 - 4401600

Intron Length:

1692

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TATTTACTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

CATTCTTTATTT

Flanking Amino Acid:

YPMRAAPPPPGHQQNGVINP

Intron Amino Acid Position:

969

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.9

0.94

0.9

88.2

28.2

Major BPS

83.9

0.84

73.9

41.3

Major PPT

83.5

0.75

0.8

74.7

39.9

Minor 5ss

46.6

-0.3

2.9

68.1

42.7

Minor BPS

64.2

0.52

1.6

76.5

40.9

Associated Gene:

Gene:

MYO1E

Ensembl Gene ID:

ENSAPLG00000010820

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011335

4394713 - 4457991

63279

ENSAPLT00000046452

4393901 - 4483730

89830

ENSAPLT00000035815

4393901 - 4457868

63968

ENSAPLT00000035163

4398637 - 4482054

83418

ENSAPLT00000019857

4394713 - 4482054

87342