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Intron Name: Anas_platyrhynchos_platyrhynchos_11_4424370_4425568_R


Intron Information:

Intron Rank:
12

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
4424370 - 4425568

Intron Length:
1199

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAACCAGA

5'SS Class:
major

3'SS Sequence:
TCTTACTTAATAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTGCAT

U12 Branch Point Sequence:
TCTTACTTAATA

Flanking Amino Acid:
FIELTLKAEQEEYVQEGIRW

Intron Amino Acid Position:
435

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
76
0.61
1.2
68.9
43.8

Major BPS
75
0.62
1.4
85.7
34.9

Major PPT
73.8
0.54
0.9
70
34.9

Minor 5ss
44.3
-0.6
2.7
58.2
46

Minor BPS
75.1
0.79
1.4
80.21
35.9

Associated Gene:

Gene:
MYO1E

Ensembl Gene ID:

Chromosome:
11

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

4394713 - 4482054
87342

4394713 - 4457991
63279

4393901 - 4483730
89830

4393901 - 4457868
63968

4398637 - 4482054
83418