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Intron Name: Anas_platyrhynchos_platyrhynchos_11_4498838_4499256_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4498838 - 4499256

Intron Length:

419

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAGGACTA

5'SS Class:

major

3'SS Sequence:

CATGTGCAATTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

ACTAATTCAATT

Flanking Amino Acid:

IKEMKAEVNAGFAAIYESIG

Intron Amino Acid Position:

356

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.6

0.56

1.1

64.4

41.6

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

54.9

0.11

52.7

41.5

Minor 5ss

34.3

-1.8

3.5

44.2

44.6

Minor BPS

48.3

-0

1.7

64.22

40.5

Associated Gene:

Gene:

FAM81A

Ensembl Gene ID:

ENSAPLG00000010722

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029408

4485152 - 4499396

14245

ENSAPLT00000017552

4485152 - 4499396

14245

ENSAPLT00000011166

4485643 - 4499396

13754