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Intron Name: Anas_platyrhynchos_platyrhynchos_11_4648411_4649784_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4648411 - 4649784

Intron Length:

1374

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTATGGTAG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTCCACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTTAT

U12 Branch Point Sequence:

TTTTCTTCAGTT

Flanking Amino Acid:

CNTQDCIPEIDENCKDKYYN

Intron Amino Acid Position:

601

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

68.3

39.1

Major BPS

0.47

1.2

61.1

45.5

Major PPT

88.6

0.87

0.6

84.4

23.7

Minor 5ss

42.2

-0.9

3.1

54.5

49.7

Minor BPS

63.2

0.49

1.7

84.06

37.3

Associated Gene:

Gene:

THSD4

Ensembl Gene ID:

ENSAPLG00000010423

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039851

4648268 - 4930115

281848

ENSAPLT00000020477

4647690 - 4907279

259590

ENSAPLT00000010853

4647690 - 4755212

107523

ENSAPLT00000048063

4648268 - 4927851

279584