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Intron Name: Anas_platyrhynchos_platyrhynchos_11_4907280_4930010_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

4907280 - 4930010

Intron Length:

22731

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTGGA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTCTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTAAA

U12 Branch Point Sequence:

GCAGTGTTAAAT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

72.4

39.5

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

89.2

0.88

0.6

89.2

19.7

Minor 5ss

31.6

-2.1

3.1

31.8

42.6

Minor BPS

44.6

-0.3

2.2

57.96

44.8

Associated Gene:

Gene:

THSD4

Ensembl Gene ID:

ENSAPLG00000010423

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039851

4648268 - 4930115

281848