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Intron Name: Anas_platyrhynchos_platyrhynchos_11_4971860_4976194_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4971860 - 4976194

Intron Length:

4335

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTATG

5'SS Class:

strong_major

3'SS Sequence:

TTCTCCCATGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

CTTGTAATAAAT

Flanking Amino Acid:

AKNVHMEKLEEIKERKTFCQ

Intron Amino Acid Position:

683

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.5

1.12

0.7

90.9

28.7

Major BPS

84.4

0.85

1.1

34.5

Major PPT

79.1

0.66

0.8

29.9

Minor 5ss

39.3

-1.2

2.8

50.6

45.9

Minor BPS

45.5

-0.2

66.81

43.6

Associated Gene:

Gene:

LRRC49

Ensembl Gene ID:

ENSAPLG00000009920

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010357

4971653 - 5016992

45340