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Intron Name: Anas_platyrhynchos_platyrhynchos_11_4979838_4981030_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4979838 - 4981030

Intron Length:

1193

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGAATG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTAAAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTAAA

U12 Branch Point Sequence:

TTTTTTTTAAAG

Flanking Amino Acid:

KLKLKFPNSVHLKFKETNLV

Intron Amino Acid Position:

533

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.7

0.82

0.9

77.2

37.6

Major BPS

77.5

0.68

0.8

76.2

24.6

Major PPT

87.3

0.84

0.9

89.9

23.6

Minor 5ss

37.2

-1.4

46.5

42.8

Minor BPS

72.6

0.57

1.4

75.95

35.7

Associated Gene:

Gene:

LRRC49

Ensembl Gene ID:

ENSAPLG00000009920

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010357

4971653 - 5016992

45340