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Intron Name: Anas_platyrhynchos_platyrhynchos_11_4987873_4995073_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4987873 - 4995073

Intron Length:

7201

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGAAAT

5'SS Class:

major

3'SS Sequence:

TTTTTTCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATAAA

U12 Branch Point Sequence:

CTTTTATAAATT

Flanking Amino Acid:

LRQLDMKRITEEERRMASVA

Intron Amino Acid Position:

375

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.4

0.58

74.8

35.1

Major BPS

78.6

0.71

78.6

Major PPT

95.5

1.02

0.5

88.9

28.1

Minor 5ss

37.3

-1.4

3.1

55.2

42.8

Minor BPS

54.6

0.22

1.9

76.06

41.3

Associated Gene:

Gene:

LRRC49

Ensembl Gene ID:

ENSAPLG00000009920

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010357

4971653 - 5016992

45340