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Intron Name: Anas_platyrhynchos_platyrhynchos_11_5001220_5003214_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5001220 - 5003214

Intron Length:

1995

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATA|GTAAGGAAC

5'SS Class:

major

3'SS Sequence:

TCTTTCCTTCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTTAT

U12 Branch Point Sequence:

AGCTGCTGAATT

Flanking Amino Acid:

NLRHNQVSAIKDVDTLPHLQ

Intron Amino Acid Position:

305

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.54

68.5

36.2

Major BPS

79.9

0.74

0.9

69.7

37.1

Major PPT

84.8

0.78

0.7

77.7

31.1

Minor 5ss

34.4

-1.8

3.2

44.6

38.4

Minor BPS

51.1

0.11

1.9

67.9

43.1

Associated Gene:

Gene:

LRRC49

Ensembl Gene ID:

ENSAPLG00000009920

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010357

4971653 - 5016992

45340