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Intron Name: Anas_platyrhynchos_platyrhynchos_11_5012108_5012817_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5012108 - 5012817

Intron Length:

710

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAAGG

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTGTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

GTTACTTTTATA

Flanking Amino Acid:

ILNSDRLTLERQKLTVCPII

Intron Amino Acid Position:

166

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.9

71.5

40.2

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

87.3

0.84

0.8

80.2

37.3

Minor 5ss

27.4

-2.6

2.7

31.3

42.4

Minor BPS

0.24

1.6

68.5

37.6

Associated Gene:

Gene:

LRRC49

Ensembl Gene ID:

ENSAPLG00000009920

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010357

4971653 - 5016992

45340