Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_11_5041236_5041358_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5041236 - 5041358

Intron Length:

123

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAACTTCA

5'SS Class:

strong_major

3'SS Sequence:

ATGTGTTTTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TTGTTTTTGATG

Flanking Amino Acid:

AQLAQYNFILVVGEKEKANN

Intron Amino Acid Position:

582

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

1.1

77.7

33.5

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

79.6

0.67

0.9

73.4

41.3

Minor 5ss

-0.4

2.5

59.7

44.7

Minor BPS

63.1

0.27

1.3

64.84

38.1

Associated Gene:

Gene:

TARS3

Ensembl Gene ID:

ENSAPLG00000008485

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023671

5041087 - 5048637

7551

ENSAPLT00000008893

5041087 - 5051885

10799