Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_11_5043929_5044157_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5043929 - 5044157

Intron Length:

229

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATTAAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTATGATTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTGTTAATAAAT

Flanking Amino Acid:

DLEIWDHAEKQLQNSLNNFA

Intron Amino Acid Position:

437

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

88.9

24.6

Major BPS

96.5

1.15

0.6

34.2

Major PPT

73.9

0.54

75.5

38.5

Minor 5ss

37.5

-1.4

2.8

51.2

45.3

Minor BPS

0.08

75.26

40.9

Associated Gene:

Gene:

TARS3

Ensembl Gene ID:

ENSAPLG00000008485

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023671

5041087 - 5048637

7551

ENSAPLT00000008893

5041087 - 5051885

10799