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Intron Name: Anas_platyrhynchos_platyrhynchos_11_5225398_5225937_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5225398 - 5225937

Intron Length:

540

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTATGTCAA

5'SS Class:

major

3'SS Sequence:

TCATTGATGCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTATAAT

U12 Branch Point Sequence:

TGTTTGTGAAAT

Flanking Amino Acid:

GLEEGDQILRVNNVDFTNII

Intron Amino Acid Position:

424

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

66.8

40.4

Major BPS

75.5

0.63

1.1

34.4

Major PPT

61.5

0.26

1.1

55.1

44.4

Minor 5ss

39.2

-1.2

2.8

40.9

45.4

Minor BPS

49.1

0.01

2.2

74.71

41.6

Associated Gene:

Gene:

TJP1

Ensembl Gene ID:

ENSAPLG00000007911

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020858

5207389 - 5247213

39825

ENSAPLT00000008293

5208603 - 5247213

38611