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Intron Name: Anas_platyrhynchos_platyrhynchos_11_5324528_5361328_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5324528 - 5361328

Intron Length:

36801

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CATTTTTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTCAT

U12 Branch Point Sequence:

TTTCGTTTCATT

Flanking Amino Acid:

VSWKRPLSLVITFFMLLSAV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

71.1

32.7

Major BPS

82.2

0.8

1.1

85.7

34.9

Major PPT

88.1

0.86

0.7

80.5

36.7

Minor 5ss

28.6

-2.4

32.8

35.9

Minor BPS

49.8

0.07

2.1

76.64

40.8

Associated Gene:

Gene:

FAM189A1

Ensembl Gene ID:

ENSAPLG00000007880

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008177

5279015 - 5415308

136294

ENSAPLT00000037065

5279015 - 5415308

136294