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Intron Name: Anas_platyrhynchos_platyrhynchos_11_5361440_5371658_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5361440 - 5371658

Intron Length:

10219

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCTCCCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTTAT

U12 Branch Point Sequence:

GTTTACTTATGC

Flanking Amino Acid:

LVKSLEGCQLIKFDSDGVCV

Intron Amino Acid Position:

136

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.86

0.8

84.9

26.3

Major BPS

83.6

0.84

0.8

71.9

35.8

Major PPT

84.7

0.78

0.7

77.6

31.2

Minor 5ss

32.1

-2

2.8

39.2

40.5

Minor BPS

51.4

0.02

2.1

68.18

Associated Gene:

Gene:

FAM189A1

Ensembl Gene ID:

ENSAPLG00000007880

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037065

5279015 - 5415308

136294

ENSAPLT00000008177

5279015 - 5415308

136294