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Intron Name: Anas_platyrhynchos_platyrhynchos_11_5400711_5404416_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5400711 - 5404416

Intron Length:

3706

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGAAA

5'SS Class:

strong_major

3'SS Sequence:

AATTTTCGTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GACTAAT

U12 Branch Point Sequence:

GTTTCGTTAAAC

Flanking Amino Acid:

AVIGETPASQVTGTDQQASE

Intron Amino Acid Position:

315

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.6

0.98

0.8

28.8

Major BPS

0.47

1.2

69.9

35.3

Major PPT

72.6

0.51

70.9

Minor 5ss

31.6

-2.1

3.1

46.4

Minor BPS

62.4

0.37

2.2

76.66

39.1

Associated Gene:

Gene:

FAM189A1

Ensembl Gene ID:

ENSAPLG00000007880

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008177

5279015 - 5415308

136294

ENSAPLT00000037065

5279015 - 5415308

136294

ENSAPLT00000025629

5279015 - 5415308

136294