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Intron Name: Anas_platyrhynchos_platyrhynchos_11_5408163_5411748_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5408163 - 5411748

Intron Length:

3586

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTGTA

5'SS Class:

strong_major

3'SS Sequence:

TCTTTGGTTCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCTTGAT

U12 Branch Point Sequence:

CTTTGGTTCAAG

Flanking Amino Acid:

DPVSCSSYAEGDHCAWTPPA

Intron Amino Acid Position:

538

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.6

0.89

0.9

81.5

32.7

Major BPS

66.1

0.4

1.3

59.3

47.1

Major PPT

69.6

0.44

1.1

67.2

Minor 5ss

34.9

-1.7

3.5

48.5

47.7

Minor BPS

39.5

-0.9

2.7

51.73

48.5

Associated Gene:

Gene:

FAM189A1

Ensembl Gene ID:

ENSAPLG00000007880

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025629

5279015 - 5415308

136294

ENSAPLT00000008177

5279015 - 5415308

136294