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Intron Name: Anas_platyrhynchos_platyrhynchos_11_5413056_5415122_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5413056 - 5415122

Intron Length:

2067

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTCAC

5'SS Class:

strong_major

3'SS Sequence:

TTTTGATGAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TTTTGATGAACA

Flanking Amino Acid:

AIFSANIIDQVITSSQQSAN

Intron Amino Acid Position:

674

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.5

0.86

0.9

36.6

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

70.6

0.46

1.1

66.5

43.2

Minor 5ss

40.6

-1

2.8

52.4

44.8

Minor BPS

56.5

0.2

2.1

77.77

38.6

Associated Gene:

Gene:

FAM189A1

Ensembl Gene ID:

ENSAPLG00000007880

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037065

5279015 - 5415308

136294

ENSAPLT00000025629

5279015 - 5415308

136294

ENSAPLT00000008177

5279015 - 5415308

136294