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Intron Name: Anas_platyrhynchos_platyrhynchos_11_5424730_5426128_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5424730 - 5426128

Intron Length:

1399

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATT|GTAAGTTTC

5'SS Class:

major

3'SS Sequence:

GTTCCTATCTAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CCTGTTTTAATT

Flanking Amino Acid:

QLGFSVQNGIIINHGVATAG

Intron Amino Acid Position:

686

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.9

0.66

32.4

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

65.1

0.34

1.1

68.4

36.3

Minor 5ss

47.3

-0.3

2.8

67.6

37.4

Minor BPS

61.1

0.43

1.4

69.97

42.5

Associated Gene:

Gene:

APBA2

Ensembl Gene ID:

ENSAPLG00000007575

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019960

5423488 - 5459617

36130