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Intron Name: Anas_platyrhynchos_platyrhynchos_11_5426249_5428595_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5426249 - 5428595

Intron Length:

2347

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAACTAG

5'SS Class:

major

3'SS Sequence:

GGATATTTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATGAT

U12 Branch Point Sequence:

TCTTCCAGAAAT

Flanking Amino Acid:

HFSNSENCKEGLKNQTQVKL

Intron Amino Acid Position:

575

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.4

0.69

68.2

39.5

Major BPS

84.6

0.86

41.2

Major PPT

72.8

0.51

64.9

45.2

Minor 5ss

42.5

-0.8

49.2

Minor BPS

57.8

0.32

1.9

79.58

41.7

Associated Gene:

Gene:

APBA2

Ensembl Gene ID:

ENSAPLG00000007575

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045889

5419195 - 5459617

40423