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Intron Name: Anas_platyrhynchos_platyrhynchos_11_5459618_5466626_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

5459618 - 5466626

Intron Length:

7009

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAGTTTC

5'SS Class:

strong_major

3'SS Sequence:

ATCTTCCCTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

TTTTCCTGAACA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.8

80.1

28.4

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

80.3

0.68

0.8

73.5

30.9

Minor 5ss

39.5

-1.2

2.9

49.4

41.4

Minor BPS

85.6

1.11

1.2

92.78

26.2

Associated Gene:

Gene:

APBA2

Ensembl Gene ID:

ENSAPLG00000007575

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045909

5419195 - 5466842

47648

ENSAPLT00000023098

5419195 - 5466842

47648