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Intron Name: Anas_platyrhynchos_platyrhynchos_11_5539869_5543164_F

Intron Information:

Intron Rank:

Intron Class:

minor-like

Intron Phase:

Intron Coordinates:

5539869 - 5543164

Intron Length:

3296

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATCCTTC

5'SS Class:

weak_minor

3'SS Sequence:

ATAATATTTGCAG|T

3'SS Class:

minor_BPS

U2 Branch Point Sequence:

TTCTAAA

U12 Branch Point Sequence:

TTGTTCTAAATA

Flanking Amino Acid:

NVITKFCQLSVGGQKLYVRL

Intron Amino Acid Position:

435

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.3

0.45

1.2

65.8

41.1

Major BPS

85.3

0.88

0.8

84.2

21.8

Major PPT

0.54

66.9

43.2

Minor 5ss

1.18

1.3

85.1

32.4

Minor BPS

65.5

0.48

1.6

74.21

38.4

Associated Gene:

Gene:

FAN1

Ensembl Gene ID:

ENSAPLG00000007284

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007583

5538435 - 5556044

17610