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Intron Name: Anas_platyrhynchos_platyrhynchos_11_5546170_5547300_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5546170 - 5547300

Intron Length:

1131

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGTAAAC

5'SS Class:

major

3'SS Sequence:

TCTTACCTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTAAAT

U12 Branch Point Sequence:

CTGTTCTTACCT

Flanking Amino Acid:

WNKLKKHPSLSYHRVLPEYL

Intron Amino Acid Position:

669

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.2

0.52

1.1

67.9

37.3

Major BPS

73.5

0.58

79.3

29.4

Major PPT

84.6

0.78

0.8

81.3

30.3

Minor 5ss

32.4

-2

3.2

42.8

44.3

Minor BPS

65.7

0.57

1.7

78.77

43.9

Associated Gene:

Gene:

FAN1

Ensembl Gene ID:

ENSAPLG00000007284

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007583

5538435 - 5556044

17610