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Intron Name: Anas_platyrhynchos_platyrhynchos_11_5549888_5550822_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5549888 - 5550822

Intron Length:

935

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TTAATATGTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

GTTGTTTTAATA

Flanking Amino Acid:

PVITVEDVTHVTIKGKMCPQ

Intron Amino Acid Position:

801

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.9

85.3

25.4

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

72.9

0.52

1.1

70.3

44.4

Minor 5ss

37.5

-1.4

2.8

46.9

41.8

Minor BPS

65.8

0.49

1.3

70.9

Associated Gene:

Gene:

FAN1

Ensembl Gene ID:

ENSAPLG00000007284

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007583

5538435 - 5556044

17610