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Intron Name: Anas_platyrhynchos_platyrhynchos_11_5550992_5552310_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5550992 - 5552310

Intron Length:

1319

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAATGTTA

5'SS Class:

major

3'SS Sequence:

GTTTGCTCTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ATTTTTATGACT

Flanking Amino Acid:

THYRKNGYDQGIHGEGSTFI

Intron Amino Acid Position:

857

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.52

1.1

68.5

38.9

Major BPS

96.5

1.15

0.6

34.2

Major PPT

69.9

0.45

1.1

72.4

38.1

Minor 5ss

39.9

-1.1

3.3

47.2

48.3

Minor BPS

62.4

0.47

1.6

81.65

33.3

Associated Gene:

Gene:

FAN1

Ensembl Gene ID:

ENSAPLG00000007284

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007583

5538435 - 5556044

17610