Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_11_5565701_5565887_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5565701 - 5565887

Intron Length:

187

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTTGTACC

5'SS Class:

major

3'SS Sequence:

TGTTCCCATCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

ATAATATTAATT

Flanking Amino Acid:

LENTHWLEYIRSFLKHSAEL

Intron Amino Acid Position:

292

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.2

0.62

1.1

72.7

36.5

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

75.8

0.58

0.9

39.5

Minor 5ss

39.4

-1.2

2.3

47.3

41.1

Minor BPS

57.9

0.33

1.6

73.13

37.4

Associated Gene:

Gene:

MTMR10

Ensembl Gene ID:

ENSAPLG00000006723

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007015

5560750 - 5593899

33150