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Intron Name: Anas_platyrhynchos_platyrhynchos_11_5606447_5607485_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5606447 - 5607485

Intron Length:

1039

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGA|GTATGCAAG

5'SS Class:

weak_major

3'SS Sequence:

CTGTTTTATGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTTAT

U12 Branch Point Sequence:

GTGTTAAAAACA

Flanking Amino Acid:

GDQDERDRGLKLFLNDEELK

Intron Amino Acid Position:

950

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

61.6

0.28

1.1

55.2

43.7

Major BPS

78.7

0.71

1.2

71.7

44.6

Major PPT

81.1

0.7

0.9

77.1

36.2

Minor 5ss

46.1

-0.4

2.6

53.3

44.9

Minor BPS

-0.4

2.1

57.8

41.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005599

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018859

5603372 - 5638723

35352

ENSAPLT00000005819

5603372 - 5638723

35352