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Intron Name: Anas_platyrhynchos_platyrhynchos_11_5612986_5613603_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5612986 - 5613603

Intron Length:

618

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTTAGTAAG

5'SS Class:

major

3'SS Sequence:

GGTCTCTCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

ATGATAAGAACC

Flanking Amino Acid:

GPYVMMIGKMMIDMLYFVVI

Intron Amino Acid Position:

771

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.2

0.62

1.1

71.8

39.4

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

76.6

0.6

0.9

69.7

36.7

Minor 5ss

31.6

-2.1

2.4

32.3

35.6

Minor BPS

42.2

-0.6

1.8

52.7

37.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005599

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018859

5603372 - 5638723

35352

ENSAPLT00000005819

5603372 - 5638723

35352