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Intron Name: Anas_platyrhynchos_platyrhynchos_11_5615716_5616065_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5615716 - 5616065

Intron Length:

350

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTCAGTACT

5'SS Class:

major

3'SS Sequence:

CATTTTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCATCAT

U12 Branch Point Sequence:

TATCAGTGAAAA

Flanking Amino Acid:

EGKEKEDENVDANADTGSRK

Intron Amino Acid Position:

600

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.3

0.6

1.3

77.1

37.8

Major BPS

75.6

0.64

1.1

76.2

37.5

Major PPT

89.9

0.9

0.7

88.2

28.6

Minor 5ss

33.9

-1.8

2.7

41.7

38.3

Minor BPS

42.7

-0.5

2.3

57.97

40.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005599

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018859

5603372 - 5638723

35352

ENSAPLT00000005819

5603372 - 5638723

35352