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Intron Name: Anas_platyrhynchos_platyrhynchos_11_5616189_5617493_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5616189 - 5617493

Intron Length:

1305

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATTTCTG

5'SS Class:

major

3'SS Sequence:

CTTTGTTGTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTGAA

U12 Branch Point Sequence:

CTGAATTGAATT

Flanking Amino Acid:

LRMRKNPGLKVIMGILFPPT

Intron Amino Acid Position:

559

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.4

0.62

67.2

43.7

Major BPS

70.6

0.51

0.9

61.4

36.2

Major PPT

80.6

0.69

0.9

75.6

38.3

Minor 5ss

-0.7

2.8

58.7

45.8

Minor BPS

47.7

-0

1.6

62.17

42.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005599

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018859

5603372 - 5638723

35352

ENSAPLT00000005819

5603372 - 5638723

35352